❖Application Level operations

•Login

•Edit preferences

•Restore preferences to default values

•Import user options from file

•Export user options to file

❖Layout operations  

•Create New Layout

•Open layout

oOpen

•Navigators and Other Dockable Windows

oRun Batch Processing

oRerun Batch Processing

oReview Batch Processing

oView Batch Actions

oView Data List

oFormat General

oFormat Overlays

oFormat Axes

oFormat Title

oFormat Legend

oFormat 3D

oFormat Specific

oFormat Size

oFormat Fill

oFormat Border/Line

oFormat Authorizations

oFormat Gate To Display

oFormat Data Image

oFormat Parameters To Display

oFormat Markers

oFormat Quadrants

oFormat Color Levels

oFormat Statistics

oFormat Gate View

oFormat Selecting Text Boxes

oFormat Proliferation Fit

oFormat DNA Fit

oFormat DNA Background

oFormat Position Markers

oFormat Regression Fit

oFormat Text Box Contents

oFormat Spreadsheet Data

oFormat 1D Stats

oFormat 2D Stats

oView Layout Messages

oView Alerts

oView Custom Tokens

oView Canned Comments

oView Compensations and Unmixing

oView Transformations

oView Run SOP

oView Snapshots

oView Standard Operating Procedures

oView Permission Rules

•Save layout

•Save layout as

•Print layout

•Clear Layout History

•Change Page Setup

•Save layout to PowerPoint

•Save PDF

•Publish Layout

❖Edit operations

•View layout options

•Change layout options

•Insert new page

•Rearrange pages

•Delete page

•View page options

•Change page options

•Align objects

•Change Object Order

❖Adjusting and resizing objects

•Move objects

•Resize objects

•Group objects

•Ungroup objects

❖View operations

•View the layout history

•View the master page

•Change the number of visible pages

•View hidden pages

❖Data file operations

•Open a Data file

•Modify the contents of a data file

•Add a column to a data file

•Delete a column from a data file

•Insert a row into a data file

•Delete a row from a data file

•Export a Data file

•Load data  that is not already loaded

•Create a new spreadsheet

•Export a Spreadsheet

•Add to data list

•Search the data list

•Remove from the data list

•Format the Data List Options

•Move a file Up in the data list

•Move a file Down in the data list

•Increment/decrement file on selected/all objects

•Change file on selected/all objects

•View file header information

•Modify file header information

•View files in memory

•Change the increment value

❖Plots and other objects operations

•Insert stats window

•Insert plots and other objects

oInsert 2D Plots

oInsert Histogram

oInsert Kinetics

oInsert Multicycle DNA

oInsert Proliferation

oInsert Subtraction

oInsert Text Box

oInsert Gate View

oInsert Picture

oInsert Data Grid

oInsert Bar

oInsert Pie

oInsert Box and Whisker

oInsert Scatter

oInsert Plate Heat Map

oInsert Gates Heat Map

oInsert Parameters Heat Map

oInsert Spectrum

oInsert Levey Jennings

oInsert AutoShapes

•Copy Data Grids

•Remove 2D plots

•Remove histograms

•Remove subtraction histograms

•Remove DNA histograms

•Remove Proliferation histograms

•Remove text boxes

•Remove picture

•Remove data

•Remove Gate View

•Remove AutoShape

•Remove stats window

•Change parameters on a histogram

•Change parameters on a 2D plot

•Add overlay to a histogram

•Add overlay to a 2D plot

•Copy Plot Data

•Remove overlay from a histogram

•Remove overlay from a 2D plot

•Reorder overlay in a histogram

•Reorder overlay in a 2D plot

•Edit the text on a text box

•View the format of a 2D plot

•View the format of a 1D plot

•View the format of an AutoShape

•View the format of a text box

•View the format of a picture

•View the format of a data object

•View the format of a statistics window

•Change the format of a 2D plot

•Change the format of a 1D plot

•Change the format of an AutoShape

•Change the format of a text box

•Change the format of a picture

•Change the format of a data object

•Change the format of a statistics window

•Change the visibility of statistics

•Autosize statistics window

•Delete Table Cells

•Insert Table

•Insert Table Cells

❖Gate, marker and quadrant operations

•Create a new gate

•Modify a gate

•Remove a gate

•Modify gate information

•Add a combination gate

•Change Gate Properties

•Create a new marker

•Modify a marker

•Remove a marker

•Gate fellowship Link

•Break Gate fellowship

•Show quadrants

•Hide quadrants

•Modify quadrants

•Gating-ML Import

•Gating-ML Export

❖Parameter Labels operations

•View parameter label sets

•Modify parameter label sets

•Load a set

•Save the list of sets

❖Batch Processing and Alerts operations

•Alerts

oRun alerts

oAdd a new alert

oDelete an alert

oEdit the text in an alert

oAdd token to alert formula

oView token properties for the alert formula

oEdit alert formula token properties

•Batch Processing

oFlag an iteration

oView batch processing options

oChange batch processing options

oAdd save batch actions

▪Add Save Layout batch action

▪Add Save PDF batch action

▪Add Save Picture batch action

▪Add Save PowerPoint batch action

▪Add Print batch action

▪Add Publish Layout batch action

▪Save Data Files

•Add Save Gating-ML

oAdd batch folders

▪Add Folder

oAdd report batch actions

▪add Export To Spreadsheet

▪add Export To Excel (Column Mode)

▪add Export To Excel (Cell Mode)

▪add Word Report

▪add PDF Form

▪add Text Report

oAdd items to reports

▪add Regular Token

▪add Statistic Token

▪add Keyword Token

▪add Picture

▪add Text Box

▪add PDF

▪add Layout

▪add PowerPoint

▪add FCS File

oRename batch actions

oPaste batch actions

oDelete batch actions

oView batch action details

oChange batch action details

oChange batch action Running Options

❖Canned Comment operations

•Add a new Canned Comment

•Delete a Canned Comment

•Edit the text in a canned comment

•Add a token to a canned comment

•View canned comment token properties

•Edit canned comment formula token properties

❖Channel Calibration operations

•View Channel Calibration settings

•Add a Channel Calibration

•Delete a Channel Calibration

•Load Channel Calibration settings

•Save Channel Calibration settings

•Modify settings

•Calculate Channel Calibration

•Edit a Channel Calibration

❖Compensation operations

•Modify compensation

•Import compensation

•Export compensation

•Create compensation

•Delete compensation

•Create Unmixing

•Delete Unmixing

•Assign compensation

•Run Automatic Compensation

•Apply to all plots

•Apply to selected plots

❖Transformation operations

•Create Parameter Math transformation

•Create PCA transformation

•Create Pipeline Transformation

•Create Divide Mean and SD pipeline step

•Create Divide Max and Min pipeline step

•Create Thresholding pipeline step

•Create Scaling pipeline step

•Create Merge to Spectra pipeline step

•Create Python pipeline step

•Create Simple parameter math pipeline step

•Create UMAP pipeline step

•Create Downsampling pipeline step

•Create tSNE pipeline step

•Create MST pipeline step

•Create Graph Plot Layout pipeline step

•Create PCA pipeline step

•Create Parameter Removal pipeline step

•Create Unmixing pipeline step

•Create spectral extraction pipeline step

•Create flowAI pipeline step

•Create flowSOM pipeline step

•Create SPADE pipeline step

•Create SOM Pipeline step

•Create Batch SOM pipeline step

•Create Consensus pipeline step

•Create Kmeans transformation (NB: this also apply to Kmeans pipeline step)

•Create Hierarchical pipeline step

•Create ramp parameter pipeline step

•Create Bernoulli parameter pipeline step

•Create Beta parameter pipeline step

•Create Binomial parameter pipeline step

•Create Cauchy parameter pipeline step

•Create ChiSquare parameter pipeline step

•Create Erlang parameter pipeline step

•Create Exponent parameter pipeline step

•Create FDistribution parameter pipeline step

•Create Gamma parameter pipeline step

•Create GenPareto parameter pipeline step

•Create Geometric parameter pipeline step

•Create Gumbel parameter pipeline step

•Create HyperGeometric parameter pipeline step

•Create Laplace parameter pipeline step

•Create Logistic parameter pipeline step

•Create LogNormal parameter pipeline step

•Create Maxwell parameter pipeline step

•Create NegBinomial parameter pipeline step

•Create Normal parameter pipeline step

•Create Poisson parameter pipeline step

•Create Rayleigh parameter pipeline step

•Create StudentTDist parameter pipeline step

•Create Triangular parameter pipeline step

•Create Uniform parameter pipeline step

•Create Weibull parameter pipeline step

•Create R Add Parameters  transformation

•Create R Add Clustering  transformation

•Create tSNE transformation

•Create K-Nearest Neighbors parameter pipeline step

•Create Jaccard Similarity pipeline step

•Create SPADE transformation

•Modify transformation

•Load Parameter Math Sequence from file

•Save Parameter Math Sequence to file

•Delete transformation

❖Other tools

•Modify Concentration calculator settings

•Concentration calculator calculate

•Histogram subtraction

•Batch export

•Diva Import

•CFlow Import

❖Security Operations

•Current user operations

oView information for the current user

oChange information for the current user

•Security System operations

oView Security System configuration

oChange Security System configuration

oSecurity System configuration - SMTP

•All user operations

oView information for all users

oAdd a user

oModify a user

oDuplicate a user

oRemove a user

oCan Log Any User Out

•Reports

oAll Events

oBilling Information

ouser Billing Information

oFailed Logins

oFull Sessions

oRemote Logouts

•Layout Status Definitions

oView Layout Status List

oAdd new Layout Status

oView and modify a Layout Status

oDuplicate a Layout Status

oRemove a Layout Status

•Security Group Definitions

oView Security Group List

oAdd new Security Group

oView and modify a Security Group

oDuplicate a Security Group

oRemove a Security Group

•Database maintenance operations

•Electronic Signature operations

oView signature list

oChange signature list

oSign

oUnsign

❖Snapshot operations

•Add snapshot

•Edit snapshot

•Delete snapshot

•Apply snapshot

❖SOP operations

•Add SOP Step

•Delete SOP Step

•Edit SOP Step

•Reset SOP Run Status

•Rerun SOP

❖Permission Rule operations

•Add Permission Rule

•Delete Permission Rule

•Edit Permission Rule

❖Help operations

•View help

•View tutorials

•View manual

•Go to the De Novo Software web site

•Enter countercode

•View About screen

❖Panel operations

•View the panel information

•Add a panel

•Edit a panel

•Remove a panel

•Load panels from a file

•Save panels to a file

•Change the panel information

•Change the name of a panel

•Change the number of tubes in a panel

❖Token operations

•Custom Tokens

oAdd custom token

oDelete custom token

oAdd token to custom token formula

oView custom formula token properties

oEdit custom formula token properties

oEdit the text in a custom formula

•Change Font Classification

•Add Font Classification

•Edit Font Classification

•Reorder Font Classification

•Remove Font Classification

•Token Bounds Change

•Add Statistic Classification

•Edit Statistic Classification

•Reorder Statistic Classification

•Remove Statistic Classification

•Add Keyword

•Remove Keyword

•Add token to a text box

•View text box token properties

•Edit text box token properties

❖Formatting Operations

•Bold

•Bullets

•Font

•Font Background

•Font Color

•Font Name

•Font Size

•Gate Formula Change

•Indent Text

•Italics

•Justify Text

•Underline

❖Keywords Anonymizer

❖Page Tab Operations

•Change Page Tab Color Classification

•Add Page Tab Color Classification

•Edit Page Tab Color Classification

•Reorder Page Tab Color Classification

•Remove Page Tab Color Classification

❖Override Authorizations